Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

Download FIRM

Citation

GLB Brain Sun Cluster Number 8 (113 genes) This page contains all miRNA mediated regulation and functional enrichment for GLB Brain Sun cluster number 8. Information about brain cancer can be found on Wikipedia, and further information about the "GLB Brain Sun" dataset can be found in Sun et al., 2006. Inferred miRNA Mediated Regulation Weeder-miRvestigator PITA TargetScan zzz999 hsa-mir-140-3p hsa-mir-501-5p Gene Ontology Enrichment GO ID GO Term Annotated Genes in Cluster GO:0006139 nucleobase, nucleoside, nucleotide and nucleic acid metabolic process 48 GO:0006350 transcription, DNA-dependent 43 GO:0006351 transcription, DNA-dependent 38 GO:0006355 regulation of transcription, DNA-dependent 35 GO:0009058 biosynthetic process 51 GO:0009059 macromolecule biosynthetic process 46 GO:0009889 regulation of biosynthetic process 41 GO:0010467 gene expression 48 GO:0010468 regulation of gene expression 42 GO:0010556 regulation of macromolecule biosynthetic process 41 GO:0016070 RNA metabolic process 42 GO:0019219 regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process 40 GO:0019222 regulation of metabolic process 45 GO:0031323 regulation of cellular metabolic process 42 GO:0031326 regulation of cellular biosynthetic process 41 GO:0032774 RNA biosynthetic process 38 GO:0034645 cellular macromolecule biosynthetic process 46 GO:0044249 cellular biosynthetic process 51 GO:0045449 regulation of transcription, DNA-dependent 40 GO:0051252 regulation of RNA metabolic process 35 GO:0060255 regulation of macromolecule metabolic process 44 Overlap Between miRNA Target Genes and Enriched Gene Ontology Annotations miRNA Method GO ID GO Term Overlap GO Annotated Genes Cluster Size miRNA Targets Genes P-Value hsa-mir-501-5p TargetScan GO:0006139 nucleobase, nucleoside, nucleotide and nucleic acid metabolic process 14 48 113 32 0.3495177 hsa-mir-140-3p PITA GO:0006139 nucleobase, nucleoside, nucleotide and nucleic acid metabolic process 7 48 113 13 0.1195461 hsa-mir-501-5p TargetScan GO:0006350 transcription, DNA-dependent 13 43 113 32 0.2831728 hsa-mir-140-3p PITA GO:0006350 transcription, DNA-dependent 7 43 113 13 0.06230427 hsa-mir-501-5p TargetScan GO:0006351 transcription, DNA-dependent 13 38 113 32 0.1137465 hsa-mir-140-3p PITA GO:0006351 transcription, DNA-dependent 7 38 113 13 0.02806874 hsa-mir-501-5p TargetScan GO:0006355 regulation of transcription, DNA-dependent 13 35 113 32 0.05416167 hsa-mir-140-3p PITA GO:0006355 regulation of transcription, DNA-dependent 7 35 113 13 0.01596299 hsa-mir-501-5p TargetScan GO:0009058 biosynthetic process 14 51 113 32 0.4891897 hsa-mir-140-3p PITA GO:0009058 biosynthetic process 8 51 113 13 0.05940578 hsa-mir-501-5p TargetScan GO:0009059 macromolecule biosynthetic process 13 46 113 32 0.4182099 hsa-mir-140-3p PITA GO:0009059 macromolecule biosynthetic process 7 46 113 13 0.0935565 hsa-mir-501-5p TargetScan GO:0009889 regulation of biosynthetic process 13 41 113 32 0.2052709 hsa-mir-140-3p PITA GO:0009889 regulation of biosynthetic process 7 41 113 13 0.04617554 hsa-mir-501-5p TargetScan GO:0010467 gene expression 15 48 113 32 0.2099053 hsa-mir-140-3p PITA GO:0010467 gene expression 8 48 113 13 0.03836331 hsa-mir-501-5p TargetScan GO:0010468 regulation of gene expression 14 42 113 32 0.1304051 hsa-mir-140-3p PITA GO:0010468 regulation of gene expression 7 42 113 13 0.05379964 hsa-mir-501-5p TargetScan GO:0010556 regulation of macromolecule biosynthetic process 13 41 113 32 0.2052709 hsa-mir-140-3p PITA GO:0010556 regulation of macromolecule biosynthetic process 7 41 113 13 0.04617554 hsa-mir-501-5p TargetScan GO:0016070 RNA metabolic process 14 42 113 32 0.1304051 hsa-mir-140-3p PITA GO:0016070 RNA metabolic process 7 42 113 13 0.05379964 hsa-mir-501-5p TargetScan GO:0019219 regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process 13 40 113 32 0.1711857 hsa-mir-140-3p PITA GO:0019219 regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process 7 40 113 13 0.03938129 hsa-mir-501-5p TargetScan GO:0019222 regulation of metabolic process 14 45 113 32 0.2261657 hsa-mir-140-3p PITA GO:0019222 regulation of metabolic process 7 45 113 13 0.08214142 hsa-mir-501-5p TargetScan GO:0031323 regulation of cellular metabolic process 13 42 113 32 0.2427038 hsa-mir-140-3p PITA GO:0031323 regulation of cellular metabolic process 7 42 113 13 0.05379964 hsa-mir-501-5p TargetScan GO:0031326 regulation of cellular biosynthetic process 13 41 113 32 0.2052709 hsa-mir-140-3p PITA GO:0031326 regulation of cellular biosynthetic process 7 41 113 13 0.04617554 hsa-mir-501-5p TargetScan GO:0032774 RNA biosynthetic process 13 38 113 32 0.1137465 hsa-mir-140-3p PITA GO:0032774 RNA biosynthetic process 7 38 113 13 0.02806874 hsa-mir-501-5p TargetScan GO:0034645 cellular macromolecule biosynthetic process 13 46 113 32 0.4182099 hsa-mir-140-3p PITA GO:0034645 cellular macromolecule biosynthetic process 7 46 113 13 0.0935565 hsa-mir-501-5p TargetScan GO:0044249 cellular biosynthetic process 14 51 113 32 0.4891897 hsa-mir-140-3p PITA GO:0044249 cellular biosynthetic process 8 51 113 13 0.05940578 hsa-mir-501-5p TargetScan GO:0045449 regulation of transcription, DNA-dependent 13 40 113 32 0.1711857 hsa-mir-140-3p PITA GO:0045449 regulation of transcription, DNA-dependent 7 40 113 13 0.03938129 hsa-mir-501-5p TargetScan GO:0051252 regulation of RNA metabolic process 13 35 113 32 0.05416167 hsa-mir-140-3p PITA GO:0051252 regulation of RNA metabolic process 7 35 113 13 0.01596299 hsa-mir-501-5p TargetScan GO:0060255 regulation of macromolecule metabolic process 14 44 113 32 0.1908374 hsa-mir-140-3p PITA GO:0060255 regulation of macromolecule metabolic process 7 44 113 13 0.07173698

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.